rs30037465 SNP Detail

Summary

• ID
  rs30037465
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:75679789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTCTCCAG ATAGAACTGT
  CCTGTGATAA ACCATTCAAA AGTGGCCTCT CTGCAAACTT CAGGGTGTGA ATCGATGTTA
  TTATTTCTCT ATCCTAACCC AAGAAAAATC GCATATTCTT TGAAGGGCCC CATTCCTTTT
  AATGCCATTT TCCGTGGATA TAAACAAAGC TTTTGGGACT CCAGAGTCAG CCGTGATGGA
  M
  CGCACAAGCC CATGAACTGG GGACCAACTC TGAAGGTCTA GAGAATCAGG GAGGGAGGGA
  TCCTTGTTTG CCTCCGTTCT ATCAGGAACC TTTGGGAATG GGGCAGGGGG GGAGTTTCAT
  TCTACCCATG GACTCTTGCT GTAAAGGCCT TTAAGAATGC TGACCTCGGG GCTGGTGAGA
  TGGCTCAGTG GGTAAGAACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47905983	NES11931887	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30037465					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47905983	NES11931887	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75679789 () rs orientation: forward

Symbol	Name	Function Class
Gm65903	predicted gene, 65903	831 bp upstream
Rr434152	regulatory region 434152	912 bp proximal
Rr434153	regulatory region 434153	1143 bp proximal
Tssr94142	transcription start site region 94142	1990 bp downstream
Tssr94143	transcription start site region 94143	1413 bp downstream