rs30035703 SNP Detail

Summary

• ID
  rs30035703
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:75678960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCACTCA CAGATTCTCG
  AGACTGCTCG GGCTGGAGCA GCGTTGCTCC AGACTGGGGC TCCGCTTGTG GGTTACTGTT
  TGCTCCTTGG TCCCTTTCTC ACAGGAAGGC AGACCCTAAT TCCTGGCCCC ATTATTGTTC
  CCTGTTCTCA TCTTCTCCTT CCTCGCTAAC CCAAGCACTT GCCTTTCATG ACATGTTTCT
  Y
  TAGATGCTGT ATCTTGGCAG CATCTCCCAT AGAGACAGGC AGCAAGAATC AATCAATCCT
  GTCTGGGCTT TCCCGAGGAA GGTAGCAGCC ATTGGTCACC CAGTGCCAGC CCAGCCCCTC
  AGTGGGTCTG CTGTCCTCCC AAGAGGCCTT TCTCAAGACA TCATCTACAC ATTAAAAAAC
  AAAACCAGAA AATGGTGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47905971	NES11931880	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30035703					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47905971	NES11931880	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75678960 () rs orientation: forward

Symbol	Name	Function Class
Gm65903	predicted gene, 65903	2 bp upstream
Rr434152	regulatory region 434152	1741 bp proximal
Rr434153	regulatory region 434153	1972 bp proximal
Tssr94142	transcription start site region 94142	1161 bp downstream
Tssr94143	transcription start site region 94143	584 bp downstream