rs30035698 SNP Detail

Summary

• ID
  rs30035698
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:75678458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTTTTAAG TAGCCTGCAG
  CGGCTGGAGG TCTACAGAAT CTCATTCTTG GACACCTTTT TATGAGGTCC AAAGACCCCA
  GCAAGAGTGC TCTGGCGTTT TTTTTTTTTT TTTTTTAGCT GATGGAGGAG GAGAGTCGAT
  AGGGAAGGGA CCCAGACCCC GCCAAGCAAC TTCCATAGTG TCCCTTCTTC TCTCTAAGTG
  Y
  TCTGTGCCAC TCCTTGTGTT CATGGAGGCT GCTCCCCGGG ATCGAGGGGG GTGGGGGCAG
  CTGGATCAAC CGTAACCAAA ATGTTTGAAA TCTCATCCTT CAGGTCCTCC AGCCCACTCT
  GCCCCTCACA CCTATGTATC AGGTTGTCTT CAACCCTGAG AAATCCCCTC CAACCTGGAA
  GGCTCAGAGA GGTTTCCCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47905965	NES11931876	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30035698					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47905965	NES11931876	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:75678458 () rs orientation: forward

Symbol	Name	Function Class
Gm65903	predicted gene, 65903	within coordinates
Tssr94142	transcription start site region 94142	659 bp downstream
Tssr94143	transcription start site region 94143	82 bp downstream