rs30025069 SNP Detail

Summary

• ID
  rs30025069
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:88938246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGAACAAGAA ACCCAGTGAG GCTCCGCAGG CTGAGAGCAG AAGGCCTGGG TCCACTTATC
  CCAACCAGAA AGGTGGTGCC ATCTCATTGT AGAGGGGAGG ACCACACATC TGGTCCCCTG
  ACCACGTCAC ACTGGCACAT ACGTTCAGCC TGACTCCTTG CATTCTTTGG GGATAGTCTC
  ACACATATTT CTAGACTCCA GATTTCTGCC TGTGAATGTC TGGAATGTGG CTAGGGAGAC
  CAGCCACTGA AGCCAGGCCA CAGATTTGCT TACATGACAG ACTGCAAACA CCCCCCCCCC
  Y
  TTTTTTTCCC CATGACTGGC CTGGAAGTGT CTCTAAGAGT GGGTTTGGGA GAGGGGACAT
  CAGTCAAGCA TAGGCAATGA GGAATGTTGG AACAAACTTG GAGCTGCTGG TCCCAGGTGG
  CACCGCCCCA CTGGGAAAGG TGCTTTGAAG TGGCACCACT AAGGTGAAAA TGAGAGATGG
  AGGAGACGCT GGATGCTAGG GTACCTTGCA TTTTGAGTGC AGCCAGCCCT CCCCAGGCTA
  TAGATGGGTC TGAGTGGGAG TCTGATGCTT ATAACAGAAA GATGGACCCG CACATTCTTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45888690	mCV23947570	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss133368068	ENSMUSSNP5438935	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30025069					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:88938246 () rs orientation: forward

Symbol	Name	Function Class
Rr634045	regulatory region 634045	996 bp distal
Rr634046	regulatory region 634046	207 bp distal