rs30022277 SNP Detail

Summary

• ID
  rs30022277
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119454236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAGC AAGCAAACAA GCAAATAAAC
  R
  AATAACTAAG GAATGACTTT CCACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45887618	mCV24874549	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss133589802	ENSMUSSNP5354992	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss321928118	CHEV_6_119427293	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30022277					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119454236 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17911	CpG island 17911	1593 bp proximal
Rr637690	regulatory region 637690	381 bp proximal
Rr637691	regulatory region 637691	1903 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron