rs30020851 SNP Detail

Summary

• ID
  rs30020851
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:89316869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAG GAAGCAGCAG AATGGTGGGA
  R
  GGTATAGGAA GGAGGGACAG AGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45886735	mCV24907679	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss133371806	ENSMUSSNP1481061	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss321851941	CHEV_6_89289881	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30020851					SNP	A	A	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89316869 () rs orientation: forward

Symbol	Name	Function Class
Plxna1	plexin A1	Intron
Rr634106	regulatory region 634106	1945 bp distal
Rr634107	regulatory region 634107	822 bp distal
Rr634108	regulatory region 634108	within coordinates