rs30016851 SNP Detail

Summary

• ID
  rs30016851
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55681144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATCAGAAGA AGCCCGGAAG GGAAGGTAGT CTACTCTCCA AGTCCCCTGA GGGTCCGCAT
  CAACACTGAG AACTGTTTTG ACAGAACTAC TGAATTGAGT GCAAAAGTCA AATTCCAGGG
  ACATCAAAAT TGGACAGACT TTCTGTTCAC TCACAAACAA CAAGAGACCC ATCCGCTTTG
  AGGGACTAGG AAGAGCCATT CTCAGGGGTC CAGTGGCTTC CAGGGTTGGC AGGAATAGCT
  TGCTGTAGGC AAAAGGGCAA GGAACATTGA GTAGCAGAAA TGGAAGCAAA TAATTTATTT
  W
  TTTTTTTAAA TTGCAAACTC TGATGTCTGG CCCCAGATAT TTGAGCATAT TCTCCATTCT
  TCTAACAAAA GAAACACACA TGCTTATTCC ACCCTTTTCC GCCTCATCTG GCAGCCGCTT
  TCTGGTCCAG CAGACACTAA CATCTAATGA GTCAAACTTC TCATTTTCAG ACTAATCAGT
  CGGCTGCACT AATTGCAAAT GCAAATATGC AAATTTATAT TAATTAATTA CTCTGCTAAT
  TAGTTCTGCG GTCTTTTTTG GGTAATAAAT CATTGTGCAG TGGAAGGGAA ACAAGTCCTG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45885602	mCV24548805	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30016851					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55681144 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	within coordinates
Rr631016	regulatory region 631016	within coordinates