rs30015335 SNP Detail

Summary

• ID
  rs30015335
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:103283438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTAAA TGTACTTTCA
  TGTAGGCCAG ACTGATGTAG CCAAAGATGA TGACGATGGG CCTTGGTTTT TACCTCCCAA
  ATACAGAGAT TATGAGAATT ATGCAAAAAT TTATATGTAA CATGTTATAC AGAATATTTT
  CAGTATTATG TGAATTATGT GGAATTTCAT ATACAAAATG TCATGCAGAA TATTGTGTGA
  Y
  ATGTGAATTA TGCATTACTT TATATGTAGA ATGTTATAAG AGACTATGGA AGTGTTTGTA
  ATTTTGTGAC AGCGTCTCTC TAAGTTAGGC AGACGGGCTT AGAATTTACA CATTTCTTGT
  CTAAGCTTTG TGAAGAGCTA AGATTACACG CATGCACCAA CAGATATGGC TCTGCTCACT
  CGTAAATAGA TACAGAATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ
ss45884159	mCV23998850	ABI	CRAMUS_MOUSE	f	SNP		C	T		T
ss51396003	NES13716982	PERLEGEN	MM_PANEL2	f	SNP	C			T	T	T	T
ss133435079	ENSMUSSNP6211293	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ
rs30015335					SNP	C	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51396003	NES13716982	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:103283438 () rs orientation: forward

Symbol	Name	Function Class
Rr635872	regulatory region 635872	61 bp proximal
Rr635873	regulatory region 635873	404 bp proximal