rs30011179 SNP Detail

Summary

• ID
  rs30011179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37841605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCAGTGAGA AAAGCAAAGT CACTGTTAGC AGGAGCTATA
  GCAAATAGTG GTATCATTTC TCGGGAGACA TGGGTAATAG AGCCGAGACC CGATCCTGTC
  R
  CCCTGAGACC TGATTCTGTC ACTCAGAGAT CTGATCTTGT TACCCTGAGA CCTGTTTCTG
  TCATCCCGAG ACTGCCCCTC TCACCCTGAG ATCTGTCCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45386722	mCV24931075	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss320712796	CHEV_3_37686378	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30011179					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37841605 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	335 bp distal
Rr575565	regulatory region 575565	895 bp proximal
Rr575566	regulatory region 575566	1866 bp proximal