rs30005670 SNP Detail

Summary

• ID
  rs30005670
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:119687745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGGATTT TAACGGCATA
  ATGAATTAAT TCACAAACTC GCTGAGCACA AATGATAACT TTGCTACATT TTCCAGTTGC
  AATTAGGAGG GGGTTGTATT GTTTTCCAGG ATAAAGGTGT TAGTCCAGAC TCGTGTAATG
  TAATGTGCAA CACTCTGGGG GTCTTTGGGG GGCGGGGGTT GGGGGGAAGC AAGTTTGTTT
  Y
  TGGGTGAATT TGCCCGTAAC CAACCCCTGA AATGGATGCA AATTAAAATG AGAGATTTCT
  GTGATACAAG GTAGCACTCA GCGTAGCCTT CAGGCCCGCA TCCCTAAGAG GGGGCTGGCA
  GAGCCCCAGA ATTCATTTTG CCTGCACTCT TATCCCAGAG CAGCGCAACC AGTCCATGTC
  GAAACATATC CCCGACTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45385891	mCV23482234	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss135699626	ENSMUSSNP4446451	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs30005670					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:119687745 () rs orientation: forward

Symbol	Name	Function Class
Gm66375	predicted gene, 66375	within coordinates
Gm66384	predicted gene, 66384	within coordinates
Rr583949	regulatory region 583949	154 bp distal
Rr583950	regulatory region 583950	23 bp proximal