rs29981901 SNP Detail

Summary

• ID
  rs29981901
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89265835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGGGCTTT GTTTGATGAA
  CAGCCAAAAG CCCTAGAAGC TCACTCTGGG AGTGCTGTGG TGAAACTAAC TGAGGTGACC
  TGGGATCTAC AGGGATAGGA CCCACAGCAT GGCAAATAGA TAGGCCTAGA GACTTTAGGG
  TCAGGTGGGC CAGGTGGGCC AGGTGGGGGT TGGGGGTATT TAGGAGTGGA GGGAGGATTG
  Y
  GGTCCCAGAC TTTGACCCCA GACTCCTCCT AAGTCTGTAA CACTGCTCCA ATGTTAAATG
  AATCCTTTGG GATCTCTGAG GTGAGTTTGC TGAGCAGGGG TTCAGGAATT TGTGTTCCCT
  GGTCCTTATG GGCCATAGGA AGAAGAGAGT AAAGCAGGAC TGGGGACCAG AGGCTTGGGA
  AGGTTGGAGT GTGTCTCGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45883455	mCV23956219	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss133371452	ENSMUSSNP4056129	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29981901					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89265835 () rs orientation: forward

Symbol	Name	Function Class
Rr379732	regulatory region 379732	within coordinates
Rr634095	regulatory region 634095	1568 bp distal
Rr634096	regulatory region 634096	135 bp distal