rs29974491 SNP Detail

Summary

• ID
  rs29974491
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115994075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAC CACGCCCGGC CTTCTGGCTG
  K
  TTTTTTAAGT CATTTATTTT TGAGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45881667	mCV22285908	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	T
ss133574518	ENSMUSSNP6256342	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321917119	CHEV_6_115967132	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29974491					SNP	T	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115994075 () rs orientation: forward

Symbol	Name	Function Class
Rr637138	regulatory region 637138	669 bp proximal
Rr637139	regulatory region 637139	947 bp proximal
Tmcc1	transmembrane and coiled coil domains 1	1497 bp downstream