rs29973033 SNP Detail

Summary

• ID
  rs29973033
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90755122 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG AAAGTAGCAC TGTGGGGCTA
  Y
  GGGGAGTGAG GATCAGTGTT TAATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45879968	mCV22637254	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	T
ss133379587	ENSMUSSNP2379591	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss321852705	CHEV_6_90728134	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29973033					SNP	T	T	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90755122 () rs orientation: forward

Symbol	Name	Function Class
E130314K07Rik	RIKEN cDNA E130314K07 gene	within coordinates
Iqsec1	IQ motif and Sec7 domain 1	Intron
Rr634323	regulatory region 634323	710 bp proximal