rs29972832 SNP Detail

Summary

• ID
  rs29972832
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112184862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCATGCAGG TAGAAAGTGG CCAACCTTGG ATTGAGTCCA
  TATTACTCGC ACCTACATCA TGACACATAT CCCAGAGATA TGACTGAAAG CCACTGGGCC
  M
  CCAAGCCCAC AAGTCACCAT AACAAATACA AGCATCTCTT TTCATCCCTA CATCCCATTA
  TCCTAACCAT CAATTTTACA AGAGCAGATT CTAACAGCT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45881261	mCV24108618	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss133558874	ENSMUSSNP6825986	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
ss321908050	CHEV_6_112157895	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29972832					SNP	A	A	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112184862 () rs orientation: forward

Symbol	Name	Function Class
Gm66265	predicted gene, 66265	1049 bp upstream
Rr636305	regulatory region 636305	304 bp distal
Rr636306	regulatory region 636306	452 bp distal
Rr636307	regulatory region 636307	1007 bp proximal
Rr636308	regulatory region 636308	1059 bp proximal