rs29968623 SNP Detail

Summary

• ID
  rs29968623
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180428209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGC CCAGCCCATA CTCTAAGGAG
  Y
  AGCCAGACTG TCCCTTGAGC CTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45383129	mCV23365208	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148393290	ENSMUSSNP3837434	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss320632334	CHEV_2_180521121	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs29968623					SNP	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180428209 () rs orientation: forward

Symbol	Name	Function Class
Gm75401	predicted gene, 75401	1757 bp downstream
Rr572845	regulatory region 572845	166 bp proximal
Rr572846	regulatory region 572846	430 bp proximal
Rr572847	regulatory region 572847	513 bp proximal
Rr572848	regulatory region 572848	1564 bp proximal