rs29967656 SNP Detail

Summary

• ID
  rs29967656
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17719437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCTGTGC AGGGATGCCA
  TTGTCTGCTT AGTCCCTATG TCCTTTACCA AAATCACAAC ACATTGCGTT TCAACACCAT
  TACCATTATT GTAAGCAGGG CCAGGGCTAA GTTGAGGCAT GTGAGGTTGC TGAGCTGCAG
  AAAGCTTTCT GTGAATGCTG TCTTCTCAAG ATGCAAGCGC TTCCAAAGCC CTCTCCCAGT
  Y
  CAAGTGCTAT CATATACATG GCTGCTTCTT GCATTACAAA CTAGCAAACA AAATAGCTGA
  AGACTTTACT TGCTTCAAAC TTTACTAACA ATCGTTTCCC ATCTGAGAAA CTCACAAACC
  TAGTAGCAAT GTCTATACAT TGTAATACAC AGTGTCTGAG TCACCACCTT CACACACTTG
  TCCCAGCCTG CATGTGCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45881198	mCV23969013	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133021353	ENSMUSSNP7139517	ENSEMBL	ENSEMBL_Sanger	f	SNP				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29967656					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17719437 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm43533	predicted gene 43533			within coordinates
Rr626841	regulatory region 626841			639 bp proximal
Rr626842	regulatory region 626842			1923 bp proximal
St7	suppression of tumorigenicity 7			Intron
				Noncoding-Transcript-Variant