rs29967561 SNP Detail

Summary

• ID
  rs29967561
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57523849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTACATGGT AAGACCTTAT
  CTCAAATATG ATGTATTGAT GATTAACAGG ATTGGTAATT ACAAACTCTA TAGGGAAGAC
  TAGTACCCAC CTGGGCATGT TCAACCTCCT AGGGCCTCCA AACTTAGGAA ATGTCCGGAG
  TTTCCCTCCT ACAGAAGCTC AACTGTCCAT AGTTCCTCAG TTAGGGGTGG GGGTCTCATC
  K
  TCCTTCACCA TCCACCTCCA TTCTAGAATG TTGACTGCTT GATCTTGTGT AGAACTTTCC
  AGGCAGCCAT AGTTGCTGTG AGTTCATGTG TGCAGTGGTC TTGTCATATC TAGAAAACAC
  CAGTTTTCCC TCTAGTTTTT CCTGGTCTCT GGATCTTATA ACATCTACAT CCTCTCTTTT
  GAGATAGTGC CTGAGCCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45881403	mCV23231521	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss133241541	ENSMUSSNP5287667	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29967561					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57523849 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631145	regulatory region 631145	1400 bp distal