rs29967093 SNP Detail

Summary

• ID
  rs29967093
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108236431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTTCGCCT GTTGCCTGAA GTGCTGCCAC CAAAAGATTT
  GTTGAAATCA AGTTTTTAGG TTTTTAATGT TTTTTTTTAT TTTGTTTATT TTCTATCTAA
  R
  AAATCTACAG ATTTCCAATG GGGCATGAAT TCTTGTGACA AACCAATATG AGGGCGCACT
  CTGGTTCTAA ATTATTATAA CTGTTGTCCC CCCCCCTCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45879404	mCV23137470	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss133498464	ENSMUSSNP1130643	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29967093					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108236431 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636067	regulatory region 636067	278 bp proximal
Tssr58057	transcription start site region 58057	1555 bp downstream