rs29964900 SNP Detail

Summary

• ID
  rs29964900
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:95679132 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATAAATCAG GCCGGGTGAG GCAAGTGGTG GTGTGCATTT
  CCTAGCTAGT AGCTAGGATG ATCATTTGAG AGGACTAAAA GCTGAAGACT AGTCTAACAG
  R
  GTATGAGGCC TTCTCTCAAA GAACAAAACA AACACGCACC ACCCAGAACT ATTTATTTCC
  AAGAATGGAG TCCCAGGAGA ATTCTGAGTA CTTGTGAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45879163	mCV23031026	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss133409600	ENSMUSSNP241534	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29964900					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:95679132 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr635030	regulatory region 635030			941 bp distal
Rr635031	regulatory region 635031			within coordinates
Rr635032	regulatory region 635032			158 bp proximal
Suclg2	succinate-Coenzyme A ligase, GDP-forming, beta subunit			Intron
				Noncoding-Transcript-Variant