rs29960803 SNP Detail

Summary

• ID
  rs29960803
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57521817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGAGTGGC AGTGAGCACT
  CATGATCAAG CAGGATCACA GTATCTGTTA CCAAGTGATA TATGCCAAAG CAGTGCTCTT
  AAGATATAAC TAAAACAGAG CCAAGTTCCC TCCTGTGTAA TCTTCATAAA CAGTATTCAA
  AAAATGCTTT TTTGTCAGGG CAATGAAGTG AAGGAACGAA TAATTATTTC TATGTAAACA
  Y
  ATAACAATAG AAAAGTACAA ATAATATTAG GAAAAACTGT TGTTTTGAAA TCTGGAGTGC
  TAGAAGCCTA TGGGTTTTTA ACTTGTTGGA AATAACAACT AGCTTTGTAA ACTCACTAGT
  CTATTCTGGG TCTCGTGCAA ATGACCCTTT GGAATCTGAA GGTAACAGTG TAAGAGATGA
  CGAAAGGCAT GTTTGTGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45879494	mCV25134886	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133241532	ENSMUSSNP7224164	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29960803					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57521817 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631144	regulatory region 631144	944 bp distal
Rr631145	regulatory region 631145	within coordinates