rs29947723 SNP Detail

Summary

• ID
  rs29947723
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39275164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCCCTCTG AGGAAACCAG
  CCCTAATGAA GCACATGGGC TCCACAAGCT CCTGAGAAAG TGAGGAAATG TCTTACTGGG
  TGGGGACAGA CACCCCCTAA TGGCCAGGGA AGACAGTGAG TGTCAAACTA TTCCTATCAG
  AGTGTATAAC AAATCACTTG GCCATCAGCT GGTGACCCTG TGGGAAACAC ATAAACAGAG
  M
  GTGTATATTC ATAGCATCTA AACTATACTT ATATTTTTAA TATGAATTAT TAAGTATAAT
  GAGTAATATG CATTTAAGTA TACACACACG CGCACACACA CATTCATCCT GTCTCAGAAA
  ATTCTGAATG TTGGCTAGGA GAGAGAACAG ACTGCCACAC AATAATATGA AAGTGAATAC
  CCACAGTGTC TATACTCTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49583699	NES12873135	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs29947723					SNP	A	C	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49583699	NES12873135	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39275164 () rs orientation: forward

Symbol	Name	Function Class
Rr575743	regulatory region 575743	18 bp distal
Rr575744	regulatory region 575744	93 bp distal