rs29936995 SNP Detail

Summary

• ID
  rs29936995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39449863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTGGAAT ATGAGAAAAT
  GAAGGAAAAA AAAAAAAAGC TCTTTGGGGT TTACCAAGGT TCAATGATGC AGCAACTATC
  CCAAGTACAT TTGAAACATC ATCAGGTGTA TAGTTAGAAA AGAGTGAGAG ATAAGACCAG
  GTAAGAAATG TGGGTGGGGC ATCATTTAGA GCCTGTGGAG CAATTAGATG TGGCAGAAAC
  R
  GGCAGAATAA AATGAGTTTA GAAAGAATTT CCAGGGCGGG TAAGATGGTT CAGTTGATGA
  AGCCATTTGC CAGACAAGCC TGGTGATTTC AACATACGGA TGTCAAGGTG AGAAAGAGAG
  AAGCCATTCC AGAAAGTTGT CCTGTCATCT CCATACTACC ATAGCATGCT TGAGTCTCTG
  CCTCTAACCC TGCTCTCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49582711	NES12881034	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29936995					SNP	G	G	G	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49582711	NES12881034	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39449863 () rs orientation: forward

Symbol	Name	Function Class
Rr575754	regulatory region 575754	1360 bp proximal