rs29933721 SNP Detail

Summary

• ID
  rs29933721
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97983476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATATCCATGG CATTAGACAT TAAAGTCAGT GTTCTTCATG TATCAAAAAG GTGATTCCAG
  CAATTTCACA GGAAAGTTAC TATTTCTCGT TGTTAAAGGT ACAGTGAGAG TATTCCAGAG
  AGATTCTATT TCAGATCAAA CTATATCCAT ATCTCTGTCT ATATATATTT TTTTCCAGAA
  TATACATTTA CATATATATG TTTTCTCTGT ATACATATAT ATACACATAT ATGTACTTAT
  ATGTGCAGAG AGAGATAGAG AGGAGAGAGT ATCTATGTGT GTATGTACAT ATATATATAT
  R
  TATATATATA TATATATATA TTTATCTGTG TGTGTATGTG TGTATGTGTA CATATATATA
  TGTGTGTGTG TGTGTGTGTG TATGTGTGTG TAGAGAGAGA GAGCTACAGA GAGAGGAGAG
  ACAGAGAGAC AAAGTTTTAT ATTTTTGAAG AACTGTTTTT GTTTGTGGTA GTAGGTGTGG
  TGTGGTAGTG GTGGTGGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAAG
  GGAGTCTTGA TCTTGATCCC CAACTACCCA ATTATAAGTA CTGCACATTG GAACTTATTA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45878833	mCV23116409	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29933721					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97983476 () rs orientation: forward

Symbol	Name	Function Class
Mitf	melanogenesis associated transcription factor	Intron
Rr635255	regulatory region 635255	664 bp distal
Rr635256	regulatory region 635256	741 bp distal
Tssr57947	transcription start site region 57947	1734 bp downstream
Tssr57948	transcription start site region 57948	1426 bp downstream