rs29928443 SNP Detail

Summary

• ID
  rs29928443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112188395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATTTAACA GCTAAGGAAT GAAATTAATA TGATCCGATA
  TACAGTAGGT GCTCGGTGAA CATTACTTTC ACTTTCTACT GCAGTAAACC CACATGTGCA
  R
  TACTTCCCTT CTGCACACAA GTATAGAACA CCATCTTGCT TACTATTCAT TGCTCTTAAC
  TGCTCTTAAC CTATTTTTCA CAGTGCTTGG AATTGAATC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45877180	mCV24108641	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss133558925	ENSMUSSNP5208123	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs29928443					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112188395 () rs orientation: forward

Symbol	Name	Function Class
1700054K19Rik	RIKEN cDNA 1700054K19 gene	within coordinates
Rr636309	regulatory region 636309	741 bp distal
Rr636310	regulatory region 636310	257 bp distal
Rr636311	regulatory region 636311	259 bp distal