rs29924547 SNP Detail

Summary

• ID
  rs29924547
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152789856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTGGGCC CTTAGAACCA
  AGCCTGGGTC TTTTATGAGA ACGTGTGCTC TTAACCATCA TCTCTTCAGC CCCATGGAGC
  CTGTGTTTTG TTTGTTGGCT TGTTTAGTTT TGCTTATTTA ATCTCAGATC TCTTGAGCCT
  TTTCAACCTA CCATTCCTCC TCTGCAATCG ATGTAGCTGA CACAGAATCT AATATAAGGG
  K
  CTCTTTTATT GGAACATATG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTACCTA
  GGCATGCACA TATGTATGCA TAGGAGAGGC CAGGTGTCTT GCTCCATCAC CCTCTGCCTT
  ATTCCCCTGA GACAGGCTTT CTCACAGAGC CTGGAGATGT TTTTCAGCCA GGTTGGCAGC
  CAGCTGGTCC AAAAAGACTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45378267	mCV23536555	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
ss147977628	ENSMUSSNP7002300	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29924547					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152789856 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dusp15	dual specificity phosphatase-like 15			Intron
				Noncoding-Transcript-Variant
Rr567515	regulatory region 567515			487 bp distal