rs29923597 SNP Detail

Summary

• ID
  rs29923597
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72858879 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCAACTG AGACTCCCTC TTCCCAAATG ACTCATGTTG
  ACAAAAACCA CCTACCTTCC TTACTCAGTA CCATGCTCTC TAGTCATGCC CCACCCCCCA
  M
  CCCCCAGTCC TTTGAGACAG GGACTCTGTG TAAGAGTTCT GGCCATCCTA GAACTTACTA
  TGTATATCAG GCTAGCCTTT CTAGTCTCTT CTATCCCAT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	MSM/Ms
ss45875948	mCV22364500	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss133287829	ENSMUSSNP506753	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	MSM/Ms
rs29923597					SNP	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72858879 () rs orientation: forward

Symbol	Name	Function Class
6030456E01Rik	RIKEN cDNA 6030456E01 gene	1709 bp downstream
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632324	regulatory region 632324	333 bp distal
Rr632325	regulatory region 632325	844 bp proximal