rs29922577 SNP Detail

Summary

• ID
  rs29922577
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86638224 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTT TGCTCAAAGG ATGCAGTCTG
  K
  TTTTCTTTTG CAGTGCTGGG ATGGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45877709	mCV23944055	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss133358283	ENSMUSSNP20949	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321846911	CHEV_6_86611236	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29922577					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86638224 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm44292	predicted gene, 44292			1946 bp downstream
Mxd1	MAX dimerization protein 1			Intron
				Noncoding-Transcript-Variant
Rr633480	regulatory region 633480			293 bp distal