rs29918166 SNP Detail

Summary

• ID
  rs29918166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86637778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAG TAGAAACGAC TCCCTGCCTC
  R
  AGCAAGGCCA AGTGCAGATG GGAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45874543	mCV23944043	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss133358271	ENSMUSSNP6172453	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss321846907	CHEV_6_86610790	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs29918166					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86637778 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mxd1	MAX dimerization protein 1			Intron
				Noncoding-Transcript-Variant
Rr633480	regulatory region 633480			within coordinates