rs29917282 SNP Detail

Summary

• ID
  rs29917282
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108582375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATGCATCCA GGGAAAACAG CCCTGCACAT AAAATAAAAA TAAATAAGAA ATTTACTAAG
  TAGTTCTCAG CAAAGAAACA TTTGCATAAA AGAAGTCTCT TAACACCCAA GCCTTTTAGA
  GTTTAGCATG TCTAAGAATT CCAGCCTGTG CCCCAGATAC AATGGGACTG TGTATCAAGC
  TTTTTCTTCC CTCCCTTTTT TGATTGTTTG TTTGACTCTC ATGTAGCCCA GGCCACCAAC
  TTGAGATCTA TCTATCTATC TATCTATCTA TCTATCTATC TATCTATCTC TCTCTCTATC
  Y
  ATCCATCCAT CCATCCATCC CAGGGTGACC TTGAATTTCT GCTCCTCCTG TCTTTACTTC
  CAGACAACAC CACCACACTT GACTTTATGC TGATGATCCC TCCCAGGGCT TCAAATACTC
  TAGGCAGGCA CTCTACCCAA TGAGGCACGT CTCCAGCCCT GTTTGCTGCT TTCATTAGAG
  AGTTTAGTGT CTCCTTCAGC TGTGTACAGT GATGGCAAAG CCTGACTGTG GAGCCCACCT
  TCTGGGTTGT AGAGCGGGTC ACAGAACAGG ACAGAACAGG ATTCTTCCCT CTGCACTCTT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45874594	mCV25345361	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29917282					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108582375 () rs orientation: forward

Symbol	Name	Function Class
0610040F04Rik	RIKEN cDNA 0610040F04 gene	within coordinates
Gm67596	predicted gene, 67596	1682 bp upstream
Rr636144	regulatory region 636144	929 bp proximal