rs29916616 SNP Detail

Summary

• ID
  rs29916616
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:147854486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCCT GGGAGACATC CTGGCACTGG
  R
  GTATTCTGGA GTTACAAAAG ATGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45873769	mCV23332943	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss134024326	ENSMUSSNP5312996	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29916616					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:147854486 () rs orientation: forward

Symbol	Name	Function Class
Rr380272	regulatory region 380272	1113 bp downstream
Rr641536	regulatory region 641536	193 bp proximal
Rr641537	regulatory region 641537	488 bp proximal
Rr641538	regulatory region 641538	1983 bp proximal