rs29916384 SNP Detail

Summary

• ID
  rs29916384
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83544325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTATGCACGT
  GCATGCAGCC CTGCATGTGC CACAGTGCAC ATGTGGAGGT CAGAGGACAG CTTGTGGAGT
  CAGTTCCATC CTTCCTTCAC GTGGGCTCCA GGGATTGAAT ACCATACTTG CGTGACAAGT
  ACTTTACCCA TAAGACATCT CTCTAGCCTG CCATTAAAAA AATTTTTTTT AACTTGAATT
  Y
  CTCCCTTCTA ATGTCTGAGG GAAAATGATC ATGAACAAGT ATTTTTGTAT AGAAACAGTT
  CACTCAGAAA GTCATGAGGA CAGTCAATAA AAGATGCACT AAGGATCCTT ATCTCATATT
  TTCTGGTTTC TGAAGTTAAT CATGGAAGAA GAAAGCCTGA GCACGGGAGA GCCCTTCTTT
  GGTCTATAAA CCCCAATCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45874685	mCV22811859	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss133348375	ENSMUSSNP5789595	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29916384					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83544325 () rs orientation: forward

Symbol	Name	Function Class
Gm21284	predicted gene, 21284	696 bp upstream
Rr632893	regulatory region 632893	1627 bp proximal
Stambp	STAM binding protein	Intron