rs29914027 SNP Detail

Summary

• ID
  rs29914027
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143746076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACCAGGGT TTCAGTACCC AGCACTGCTC CCATAGTACC
  TGCTTGCAAT TTCAGCACTA CAAAGATAGA GGCAAAAGGA TCTGAAATTC AAGATCAAGG
  M
  CACCCTCAGC TACACTGTGA CTTCAGGCCA AGTTAGGTTA CAGAGGACCT TATCTTAAAA
  AACAAAAAAC AAAAACAAAA ACAAAAAATA AAAAACTAA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45375756	mCV24514997	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss147774482	ENSMUSSNP1211641	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss320535023	CHEV_2_143729892	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29914027					SNP	A	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143746076 () rs orientation: forward

Symbol	Name	Function Class
Rr566332	regulatory region 566332	within coordinates
Rr566333	regulatory region 566333	916 bp proximal