rs29911553 SNP Detail

Summary

• ID
  rs29911553
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129024760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGAGACAT AACCTGTGAG TATTCTGATC TGGAATTTCC
  CAGCCTCCTC TGGGCAATAC ATTTCTGTTG CTTAGAGTCC ACGGCGTACT GTCTTAGCAG
  Y
  CTGCATAGAT TAAGACACTA ATGTGCTCAT TGTTTGCCAA ATATAGGAAG TGAGGATGGC
  CCATGTTCCC GTGAGCTTTC ACTTTAGTGA GGGAGACTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45376497	mCV23185326	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss147582198	ENSMUSSNP6444300	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29911553					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129024760 () rs orientation: forward

Symbol	Name	Function Class
Gm14029	predicted gene 14029	within coordinates
Gm39932	predicted gene, 39932	within coordinates
Rr564860	regulatory region 564860	1115 bp distal
Rr564861	regulatory region 564861	857 bp distal
Rr564862	regulatory region 564862	within coordinates
Rr564863	regulatory region 564863	520 bp proximal
Rr564864	regulatory region 564864	963 bp proximal
Tssr26190	transcription start site region 26190	937 bp downstream