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rs29903373 SNP Detail
Summary
  • ID
    rs29903373
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:34285864 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GCTCCAATTG GTTGTTCAAT
    ATGCAGAGTA GTGGGCACTG TGAACATGCT TTAAACATGA AGCCCAAAAC CCAAGGACAA
    GATGGTTTTG TGCAACTGCA CTTCTTATGA ATATGTTCCT GTTAAATATT TCAACCACTG
    AGAGCTATCT TGATATTATC TTAGAGTTCC AAAATCCCTT CCCACACACT GTAGTCAATA
    Y
    GCCATGCTTT AACGCACCAT TTCAGAAGGC TATATAACAC AATCAAACTG CTTATAAAGG
    CTTCCTCCTA GAACCAGCAT GCATCGTAAG GGTGTGAATT CCAGCTTCTT GGTCCCAAGG
    AAAATGATGA CGTCATCGAG CTGAAAGTAC CTTTAGCTTC TCAGCTTGTA CAAAAAGGAA
    CTTCCAAAGC AAAACCCTGA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss49577689 NES12874705 PERLEGEN MM_PANEL2 f SNP C C C C C C C C C C T C C C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs29903373 SNP C C C C C C C C C C T C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss49577689 NES12874705 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:34285864 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr575112 regulatory region 575112 57 bp proximal
Rr575113 regulatory region 575113 339 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory