rs29903373 SNP Detail

Summary

• ID
  rs29903373
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34285864 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCCAATTG GTTGTTCAAT
  ATGCAGAGTA GTGGGCACTG TGAACATGCT TTAAACATGA AGCCCAAAAC CCAAGGACAA
  GATGGTTTTG TGCAACTGCA CTTCTTATGA ATATGTTCCT GTTAAATATT TCAACCACTG
  AGAGCTATCT TGATATTATC TTAGAGTTCC AAAATCCCTT CCCACACACT GTAGTCAATA
  Y
  GCCATGCTTT AACGCACCAT TTCAGAAGGC TATATAACAC AATCAAACTG CTTATAAAGG
  CTTCCTCCTA GAACCAGCAT GCATCGTAAG GGTGTGAATT CCAGCTTCTT GGTCCCAAGG
  AAAATGATGA CGTCATCGAG CTGAAAGTAC CTTTAGCTTC TCAGCTTGTA CAAAAAGGAA
  CTTCCAAAGC AAAACCCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577689	NES12874705	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903373					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577689	NES12874705	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34285864 () rs orientation: forward

Symbol	Name	Function Class
Rr575112	regulatory region 575112	57 bp proximal
Rr575113	regulatory region 575113	339 bp proximal