rs29903370 SNP Detail

Summary

• ID
  rs29903370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34285898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTGTGAA CATGCTTTAA
  ACATGAAGCC CAAAACCCAA GGACAAGATG GTTTTGTGCA ACTGCACTTC TTATGAATAT
  GTTCCTGTTA AATATTTCAA CCACTGAGAG CTATCTTGAT ATTATCTTAG AGTTCCAAAA
  TCCCTTCCCA CACACTGTAG TCAATACGCC ATGCTTTAAC GCACCATTTC AGAAGGCTAT
  R
  TAACACAATC AAACTGCTTA TAAAGGCTTC CTCCTAGAAC CAGCATGCAT CGTAAGGGTG
  TGAATTCCAG CTTCTTGGTC CCAAGGAAAA TGATGACGTC ATCGAGCTGA AAGTACCTTT
  AGCTTCTCAG CTTGTACAAA AAGGAACTTC CAAAGCAAAA CCCTGAGTCA AATCGATGTT
  TAAGGAATGT AGTTTTAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49577686	NES12874708	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G		A	A	G	A
ss134764602	ENSMUSSNP1228773	ENSEMBL	ENSEMBL_Sanger	f	SNP		A									G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29903370					SNP	A	A	A	A	A	A	G	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577686	NES12874708	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34285898 () rs orientation: forward

Symbol	Name	Function Class
Rr575112	regulatory region 575112	23 bp proximal
Rr575113	regulatory region 575113	305 bp proximal