rs29903067 SNP Detail

Summary

• ID
  rs29903067
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33971984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTTGTGT CAGGGTTTTC
  CATTGAAAAG AGCTATAGGC ATACCGTTGT AGAAGCTGGA CTGGCATTTT TTTGCCATGT
  ATAATTCTAA AGATAGTGTT GGCCTTTCTT TATGCCCACA CACTTACCCT TCAGTGCTCA
  ATATCAAACC CAAGATCTCC TCCTTCACAC ACCTGTCTGA TGCTCTGTCA CAGAGCATGT
  K
  CGAGCCTTCA GCCTTGTTTC ATGGAAGAAG TAAAACTGGC CCCCTCTGGG TTTCCACTGG
  GCCCCTTCCT TCACCCCTTC TGGAAGGAAA CCTGCCTACT TGACCTTCAG CCCGATACAT
  AATTACTTTC TTCTTTTTTA CTAAAATAGC CATAGCACAT GTAATCTTCA CACTTCCCCT
  TGGTTCATTT GTAAAATAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49579105	NES12880097	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29903067					SNP	G	G	G	G	G	G	G	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49579105	NES12880097	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33971984 () rs orientation: forward

Symbol	Name	Function Class
Rr575082	regulatory region 575082	1868 bp distal
Rr575083	regulatory region 575083	652 bp proximal
Rr575084	regulatory region 575084	1004 bp proximal
Rr575085	regulatory region 575085	1120 bp proximal