rs29895960 SNP Detail

Summary

• ID
  rs29895960
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34322007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTG GGTGCCCGAG GTCTTCTCTA
  Y
  TGAGTGGCTC TGTCTCAGGC TGAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	LG/J	NZW/LacJ	SM/J
ss49577596	NES12872577	PERLEGEN	MM_PANEL2	f	SNP	T		C
ss320701323	CHEV_3_34166780	CHEVERUD	SCREENING_POP	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	LG/J	NZW/LacJ	SM/J
rs29895960					SNP	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49577596	NES12872577	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34322007 () rs orientation: forward

Symbol	Name	Function Class
Gm52623	predicted gene, 52623	within coordinates
Rr575115	regulatory region 575115	830 bp distal