rs29876661 SNP Detail

Summary

• ID
  rs29876661
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119346401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTATTTC CAAGTTTGAC
  TCTCTAAATT TCCCATCATG TCTAAGAGCC ACCCATATTT CCAATAAATT ATCTTTTTGC
  TTACAGTAGT TGAGTCAGTT CTTGGCTTAG GGGCACACAC ACACACACAC ACACACACAT
  ACACACACAC ACACACACAC ACACACACGA CACATTGATG CTCTCTACCT CTTTGCCCTG
  M
  CTCTCACCAT GTCTTGTGTT TGTCACCCCT CTTGACAGGG ACATTCTCCT GCCATGGAGC
  ACCACCTCCT ACCTCTTAAG AAGCTCGTCC ACACACTCTA GAACCAGTGC AAGTATCACC
  TCCTCTCTAA ATCTTTTCCG TCTCTCTCCG CATGAGCACC AACTGGTATG CCTTGACCTT
  TCACAGTGAT TTTACTTAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45373184	mCV22553042	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147334496	ENSMUSSNP3229038	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320475853	CHEV_2_119341656	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29876661					SNP	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119346401 () rs orientation: forward

Symbol	Name	Function Class
Exd1	exonuclease 3'-5' domain containing 1	585 bp downstream
Gm33412	predicted gene, 33412	within coordinates
Rr563519	regulatory region 563519	738 bp distal
Rr563520	regulatory region 563520	541 bp distal
Rr563521	regulatory region 563521	970 bp proximal