rs29876452 SNP Detail

Summary

• ID
  rs29876452
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:100803705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTCTGGGGG AGGCGAGAGG GTAAGAGGGA GAGGGAGGAG
  AAAGGTTGAG AATTACTATA AGCATTGTCA GAAGATTGGC TCATATTATG CAGGCTGCCA
  R
  TCTTACAATC TACAGGATGA CCTGGCAAAC CAGGGCCTGG GTGGAGCCAA TCAGACAGAA
  GATGTTTAAG ATCTCTTTGG AGAAGAGAGA GGCTTTTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45869878	mCV24641353	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss133427749	ENSMUSSNP2543957	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321872349	CHEV_6_100776738	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29876452					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:100803705 () rs orientation: forward

Symbol	Name	Function Class
Rr635716	regulatory region 635716	1768 bp distal
Rr635717	regulatory region 635717	354 bp distal
Rr635718	regulatory region 635718	1894 bp proximal