rs29875997 SNP Detail

Summary

• ID
  rs29875997
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36587377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAT TTCTAGGTTA TTAGCAGATT
  K
  CTAACTGAAT GGTTCATGTT ATGAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45873159	mCV23227554	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss133119765	ENSMUSSNP3364416	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321785337	CHEV_6_36560442	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29875997					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36587377 () rs orientation: forward

Symbol	Name	Function Class
Rr628550	regulatory region 628550	1515 bp distal