rs29873147 SNP Detail

Summary

• ID
  rs29873147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72595819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTA CTGTTCTGTG CCACCATGCC
  R
  GGTTCTATGG TTCTCAATAC TCTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45869641	mCV24088604	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss133286293	ENSMUSSNP6040983	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss321822465	CHEV_6_72568830	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29873147					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72595819 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17549	CpG island 17549	1641 bp distal
Gm67593	predicted gene, 67593	within coordinates
Rr399708	regulatory region 399708	1893 bp downstream
Rr632246	regulatory region 632246	1847 bp distal
Rr632247	regulatory region 632247	1346 bp distal
Rr632248	regulatory region 632248	567 bp proximal
Tgoln1	trans-golgi network protein	1836 bp upstream
Tssr57152	transcription start site region 57152	1918 bp downstream