rs29871758 SNP Detail

Summary

• ID
  rs29871758
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57520293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACCCACT TTACCTTGGA
  CAGTGAGAGG GAAATATTTT CTCTTGTAAT CCCTCTGAGT ATATTAACAT AGCCTCTAAG
  TATGGATATG GAGGACACAA TTTGGTAAAA CTTTTACTCT TAACTACTGT GTAATATTTA
  GATAAAACTT AAGCGAAAAC AAAGCATTTA AGTTTTGGTC AAACATTTTT GTTCTTTAGT
  S
  GGGCCTTATA GATATTATGA AGAGTAGAAC AAGAACTCTA TTGATTTAAG CAGTGGTTTC
  ACATCAGGGT ACTGGACTTT TACCTTTCAC ACACCTAATA TAACTTTCTG ATACTCTTAT
  TACTTGCTTT ATAGCTTTCT TGTTCACCTT AGAAAAATAT CCAAAATGGA TGTATCTGGA
  GGATATCATC CTTAGTGAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45872511	mCV25134772	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss133241512	ENSMUSSNP6823304	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29871758					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57520293 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr379418	regulatory region 379418	984 bp downstream
Rr631143	regulatory region 631143	1877 bp distal
Rr631144	regulatory region 631144	355 bp proximal
Rr631145	regulatory region 631145	1336 bp proximal