rs29868588 SNP Detail

Summary

• ID
  rs29868588
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108582846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTC GGGAGAATGA GAAAGGAGAA
  Y
  TAAAGTGTTC GAAAAGGAAA GAGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45870289	mCV25345373	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss133505810	ENSMUSSNP6666155	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321893299	CHEV_6_108555879	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs29868588					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108582846 () rs orientation: forward

Symbol	Name	Function Class
0610040F04Rik	RIKEN cDNA 0610040F04 gene	within coordinates
Gm67596	predicted gene, 67596	1211 bp upstream
Rr636144	regulatory region 636144	458 bp proximal