rs29868505 SNP Detail

Summary

• ID
  rs29868505
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108237191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCACATGGA AACTCTGCAC TAATACCAGG TCAAACTAAA
  CTAAACAAGC AGATAAAAGA GTGACAAGCT TACAAAAGGT GCTATGCAGA TAAGATATCC
  M
  CTGCCGTGGA TTAGGGCTCT AGAAGGTTTC TTTTATCTGC TAGGGGTGCT TTTCATTACA
  AAGAGGTCTA TCCATCTAAC CATAGCAGCA TAGGGGCTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss45870086	mCV23137496	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss133498485	ENSMUSSNP5992606	ENSEMBL	ENSEMBL_Sanger	f	SNP			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs29868505					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108237191 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636067	regulatory region 636067	within coordinates