rs29868324 SNP Detail

Summary

• ID
  rs29868324
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:104354548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACACACAT ACTGCAAACA
  CACAGACACA CACACAATCA TCTTTATAAT ATAATGATCT CAAACATATA ATGTCAGTAA
  TGTATTTTTT TAAATTTTAA TTAATTGTTG CAATTTGAAT AGGTACAGAC TCAAGTGTTT
  GAATGCATGG CCCATAGGGA GTGGCACTAT TAGGAAGTGT GGTCTTTTTG GAGTAGAGGT
  S
  GTCTTATTGG AGGAAGTGGA ATTATTGGGG GCAGGTTTTG AGGTCTCCTA TGCTCAAGCT
  ATGTCCAATG TAACACACAG TCTGTCCTTG TTGCCTTTTT CAGATCAAGA TGTAGAACTC
  TCAGCTCTGT CTCCGGCACC ATGGTGGCCC AAACGCCACC ACGTTTCCTG TCTTGACAAT
  AATGGACTAA ACTTCTGAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45371556	mCV23468618	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	G	G
ss147150208	ENSMUSSNP301728	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		G
ss320444799	CHEV_2_104364360	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29868324					SNP	C	C	G	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:104354548 () rs orientation: forward

Symbol	Name	Function Class
Rr562086	regulatory region 562086	1302 bp proximal