rs29862931 SNP Detail

Summary

• ID
  rs29862931
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:173042593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACATATA TTAGGGTAGC
  CTTTTTTGGT TTTGCTTCTG GTTGTTTGTT TGAGACAGGG TTTCTCTGTG TAGCCCTGGC
  TGTCTTGGCA CTCACTCTGT AGACCAGGCT GGCCTTGAAC TCAGAAATCT GCCTGCCTCT
  GCCTCCCAAG TGCTGGGATT AAAGGCATGT GCCGCCACTG CCCAGCAAAT CTCTCTCTCT
  Y
  TTTTTAAAGG CTTATTTATT TTATATGAGT ACACTCATAT AAAATACTCT CATCAGACAC
  ACCAGAAGAG GGCATAGAAT CCCATTACAG ATGGTTGTGA GCCACCATGT GGTTGCTGAG
  AAGAGCAGTC AGTGCTCTTA ACCGCTAAGC CATCTCTCCA GCCCTGAGGG GATCCTAATT
  AAGTCTTCAA ATAATAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45369172	mCV22953871	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss148330728	ENSMUSSNP2587165	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss320621706	CHEV_2_173026301	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29862931					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:173042593 () rs orientation: forward

Symbol	Name	Function Class
Rr571893	regulatory region 571893	58 bp proximal