rs29861569 SNP Detail

Summary

• ID
  rs29861569
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143330990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATTCTGATTT TTAACCCTAA ATCCATCCCT GCCATCTATA TAGATGTCCA TCTTTTTCAG
  TTTTTACAGA AAGATTTAAC AGCTTACTTA TTTTACCTTA AGGTCTTTAA TGCAACCTGA
  AATTTACAAT CAGATAGATT TTAGAAGAAG TCTAGATATA TGCCCAGGAG AGGTATTGCG
  GGATCCTCTG GTAGTACTAT GTCCAATTTT CTGAGGAACC GCCAGACTGA TTTCCAGAGT
  GGTTGTACAA GCTTGCAATC CCACCAACAA TGGAGGAGTG TTTCTCTTTC TCCACATCCT
  Y
  GCCAGCATCT GCTGTCACCT GAATTTTTGA TCTTAGCCAT TCTGACTGGT GTGAGGTGGA
  ATTTCAGGGT TGTTTTGATT TGCATTTCCC TGCTGATTAA GGATGTTGAA CATTTTTTCA
  GGTGCTTCTC AGCCATTCGG TATTCCTCAG GTGAGAATTC TTTGTTTAGC TCTGAGCCCC
  ATTTTTTAAT GGGGTTATTT GATTTTCTGG AATCCACATT CTTGAATTCT TTATATATAT
  TGGAGATTAG TCCCCTATCT GATTTAGGAT AGGTAAAGAT TCTTTTCCAA TCTGTTGGTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45370221	mCV24510480	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29861569					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143330990 () rs orientation: forward

Symbol	Name	Function Class
Gm33599	predicted gene, 33599	1854 bp upstream
Rr566292	regulatory region 566292	1807 bp proximal