rs29857932 SNP Detail

Summary

• ID
  rs29857932
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32388336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGCACTGC AATAAACTGT
  CTTCATTTCT AAGTTCTCAA TAGTTTGAGT ATCCCACAAA TAGGATAAAT TTTTGTGCCC
  TGAGCTCAAA AGACAAGTCT TAAAGCTCTT CACAAACACT GGGTGCGGCC TTCACACTCT
  CCTATCAGGT CACCAGTGGC CTGGGAATGT CCGGTGTGGT CTTACAGGCA GCTGTGAGGC
  R
  TAGGCTGGGG CATGACCTTG GACTGAGGGC CAAGGTCCCC ATCTGGGAAA ACCTAGAGCA
  AGGAAACCTG CAAGGCTCCT GGGACTTAGG CACCTCTGAT GGCCCTCCTC ATCCCATCTT
  AAAACTTACA ACCTACTTTT CAAACAGACA TTTAAATTCA AAGCATGATG CATGCACTCC
  ACAGCACTCC AAAGACTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49576718	NES12857742	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs29857932					SNP	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49576718	NES12857742	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32388336 () rs orientation: forward

Symbol	Name	Function Class
Rr574940	regulatory region 574940	234 bp distal
Rr574941	regulatory region 574941	561 bp distal
Rr574942	regulatory region 574942	727 bp proximal
Zmat3	zinc finger matrin type 3	605 bp downstream