rs29851313 SNP Detail

Summary

• ID
  rs29851313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:77196811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAC ACAGCTATGT AACATAGCCT
  R
  CTCCTCATTC TTTGTTCACA AAATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39125440	mCV24822635	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss144698396	ENSMUSSNP2002430	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss324446883	CHEV_13_77187953	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29851313					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:77196811 () rs orientation: forward

Symbol	Name	Function Class
Rr482874	regulatory region 482874	within coordinates
Slf1	SMC5-SMC6 complex localization factor 1	Intron
Tssr123272	transcription start site region 123272	1274 bp upstream
Tssr123273	transcription start site region 123273	1017 bp upstream