rs29832977 SNP Detail

Summary

• ID
  rs29832977
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86992881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAT TTTATTATTA TTATATATAT
  W
  TTTTTTAATT AAGAAAGTTC ACCAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45868762	mCV22631430	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss133361317	ENSMUSSNP1299403	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321848113	CHEV_6_86965893	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29832977					SNP	T	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86992881 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nfu1	NFU1 iron-sulfur cluster scaffold			Intron
				Noncoding-Transcript-Variant
Rr633575	regulatory region 633575			879 bp proximal
Rr633576	regulatory region 633576			913 bp proximal
Rr633577	regulatory region 633577			1227 bp proximal